As a hacky workaround (maybe) for those points, perhaps Beeminder’s tags would help.
For example, you could have a tag for any goal that is a one-a-day goal and a tag for all other goals and then bookmark the dashboard pages for each and use both each day.
Similarly, have a tag for any goal that you want to do in the morning and a tag for the others.
Details about tags are at Tags + Beeminder = <3 - Is anybody else using this?
NB the www.beeminder.com/tags13 link there should be beeminder (Ping @dreev in case you want to consider editing that link? That thread is the first summary of the tags feature that I found when searching the forum. [[done]])
Also zzq’s lightweight Altbee interface lets you put a tag in the filter box (super-fast usage if your tags are just two characters long to avoid tedious typing 
). Altbee — the alternative Beeminder web interface - #16 by beeminder_user
[EDIT: sorry, no, Altbee won’t filter by tags - see my next post here for details]